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  5. Sacu_v1.1_s0008.g004054

Sacu_v1.1_s0008.g004054


Description : not classified & original description: CDS=1-759


Gene families : OG0006387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g004054

Target Alias Description ECC score Gene Family Method Actions
Adi_g022219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre07.g325736 No alias Probable plastid-lipid-associated protein 8,... 0.02 OrthoFinder output from all 47 species
Dcu_g15571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g51792.1 LOC_Os04g51792 Probable plastid-lipid-associated protein 8,... 0.03 OrthoFinder output from all 47 species
Mp2g06660.1 No alias Probable plastid-lipid-associated protein 8,... 0.04 OrthoFinder output from all 47 species
Sam_g07958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007005_P001 Zm00001e007005 Probable plastid-lipid-associated protein 8,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 82 208
No external refs found!