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  5. Sacu_v1.1_s0008.g004010

Sacu_v1.1_s0008.g004010


Description : not classified & original description: CDS=173-733


Gene families : OG0001517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001517_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g004010

Target Alias Description ECC score Gene Family Method Actions
AT1G78170 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Als_g04681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G058000.1 Ceric.17G058000 not classified & original description: pacid=50617447... 0.05 OrthoFinder output from all 47 species
Gb_29101 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_35362 No alias CFL cutin and suberin biosynthesis regulator 0.03 OrthoFinder output from all 47 species
LOC_Os02g31140.1 LOC_Os02g31140 CFL cutin and suberin biosynthesis regulator 0.02 OrthoFinder output from all 47 species
LOC_Os12g13100.1 LOC_Os12g13100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g02856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g074080.3.1 Solyc04g074080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038823_P001 Zm00001e038823 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!