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  5. Sacu_v1.1_s0008.g003975

Sacu_v1.1_s0008.g003975


Description : not classified & original description: CDS=52-2940


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0008.g003975

Target Alias Description ECC score Gene Family Method Actions
Aev_g05404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15481 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g32270.1 LOC_Os11g32270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g11033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR002934 Polymerase_NTP_transf_dom 570 609
IPR013989 Dev_and_cell_death_domain 32 166
No external refs found!