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  5. Sacu_v1.1_s0007.g003828

Sacu_v1.1_s0007.g003828 (emb1211)


Aliases : emb1211

Description : component *(Tic100) of inner envelope TIC-20 complex & original description: CDS=344-2860


Gene families : OG0006970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0007.g003828

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00213060 emb1211,... Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Adi_g076606 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Adi_g076607 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.02 OrthoFinder output from all 47 species
Aev_g01461 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
Aop_g11690 emb1211 component *(Tic100) of inner envelope TIC-20 complex &... 0.04 OrthoFinder output from all 47 species
Ceric.28G005300.1 emb1211, Ceric.28G005300 component *(Tic100) of inner envelope TIC-20 complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01031401001 emb1211 Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
Mp2g06920.1 emb1211 component Tic100 of inner envelope TIC-20 complex 0.06 OrthoFinder output from all 47 species
Solyc11g066870.3.1 emb1211, Solyc11g066870 component Tic100 of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR003409 MORN 217 232
IPR003409 MORN 193 209
IPR003409 MORN 310 325
No external refs found!