Sacu_v1.1_s0007.g003774

Description : regulatory protein of RNA homeostasis & original description: CDS=37-1155

Gene families : OG0007277 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007277_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0007.g003774
Cluster	HCCA: Cluster_40

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0013.g013393	GR-RBP3	not classified & original description: CDS=1740-2642	0.04	OrthoFinder output from all 47 species
Dac_g07866	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g01149	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c10_17920V3.1	GR-RBP3, Pp3c10_17920	RNA-binding (RRM/RBD/RNP motifs) family protein	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005672	transcription factor TFIIA complex	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	7	38
IPR000504	RRM_dom	72	112

External Links

No external refs found!