Aliases : RHA3B
Description : not classified & original description: CDS=1-771
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00019p00149380 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00021p00161170 | ATL2, TL2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT1G72200 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Adi_g044123 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g048849 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Adi_g118032 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g04809 | BRH1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g12649 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g13299 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ala_g22077 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Als_g12786 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Als_g15749 | RHA3A | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g17608 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g23533 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Als_g52149 | ATL5 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g07591 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g13275 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g26562 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene01421.t1 | Aspi01Gene01421 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene14350.t1 | Aspi01Gene14350 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene27966.t1 | Aspi01Gene27966 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene28289.t1 | Aspi01Gene28289 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene36586.t1 | Aspi01Gene36586 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene41078.t1 | Aspi01Gene41078 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene46825.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene46829.t2 | Aspi01Gene46829 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene46830.t1 | Aspi01Gene46830 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene46831.t1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene51635.t1 | ATRING1, RING1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene70368.t1 | ATL8, Aspi01Gene70368 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene70383.t1 | Aspi01Gene70383 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0006.g010071 | No alias | not classified & original description: CDS=1-183 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0093.g043291 | No alias | not classified & original description: CDS=1-675 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g31712 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.07G057600.1 | Ceric.07G057600 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.09G083300.1 | Ceric.09G083300 | not classified & original description: pacid=50586861... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.10G027700.1 | Ceric.10G027700 | not classified & original description: pacid=50612217... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.13G013700.1 | RHA3A, Ceric.13G013700 | not classified & original description: pacid=50636450... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.22G020900.1 | ATL43, Ceric.22G020900 | not classified & original description: pacid=50614198... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.22G061600.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.25G030900.1 | Ceric.25G030900 | not classified & original description: pacid=50594363... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.34G056700.1 | Ceric.34G056700 | not classified & original description: pacid=50623881... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g11681 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g13678 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g14773 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g14977 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g28799 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g32586 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g02946 | MEE16 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g07519 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g17960 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g40181 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g00529 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dde_g02621 | BRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g19799 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g00708 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g05299 | BRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g25748 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g28710 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g30250 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012018001 | XERICO | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032684001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15297 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Gb_28973 | BRH1 | Probable E3 ubiquitin-protein ligase RHA1A... | 0.03 | OrthoFinder output from all 47 species | |
Gb_28980 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Gb_36232 | No alias | IDF1 iron uptake IRT1-ubiquitin ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g11480.1 | LOC_Os01g11480 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g16120.1 | RHA2A, LOC_Os01g16120 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g53500.1 | LOC_Os01g53500 | RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g55110.1 | LOC_Os01g55110 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g60730.2 | LOC_Os01g60730 | RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g15110.1 | LOC_Os02g15110 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g36330.1 | LOC_Os02g36330 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g45710.1 | BRH1, LOC_Os02g45710 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g46600.1 | LOC_Os02g46600 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g16970.1 | LOC_Os04g16970 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g49550.1 | RHA3A, LOC_Os04g49550 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g11450.1 | ATL31, CNI1,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g45580.1 | RHA3A, LOC_Os06g45580 | RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Len_g57765 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10021g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_101154g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_12363g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_129478g0010 | BRH1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_130176g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_222729g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_25345g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_280399g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_308999g0010 | ATL2, TL2 | RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
MA_31462g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_31736g0010 | BRH1 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_462422g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_465316g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_634100g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
MA_78702g0010 | ATL8 | RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
MA_96368g0010 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
MA_98187g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_9989900g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Mp1g27170.1 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Mp2g11860.1 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Mp5g08270.1 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Msp_g09561 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g06664 | BRH1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g26608 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g27916 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g28091 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g32541 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g17726 | ATL31, CNI1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c23_1651V3.1 | Pp3c23_1651 | RING/U-box superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g24030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0022.g008676 | ATL4H | not classified & original description: CDS=1-825 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0023.g008886 | No alias | not classified & original description: CDS=1-492 | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0104.g020113 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g37113 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Smo96681 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g006910.4.1 | Solyc01g006910 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g100100.4.1 | Solyc01g100100 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g038805.1.1 | Solyc02g038805 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g008640.1.1 | RHA2A, Solyc05g008640 | RHA2 signal transducer of abscisic acid perception | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g053640.1.1 | Solyc06g053640 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g081370.1.1 | BRH1, Solyc08g081370 | E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g075320.1.1 | ATL2, TL2, Solyc09g075320 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g008080.3.1 | Solyc10g008080 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g066510.3.1 | Solyc11g066510 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Spa_g08408 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g20845 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g51562 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g53066 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g03901 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g28275 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e000398_P001 | Zm00001e000398 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e001923_P001 | ATL3, Zm00001e001923 | RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007103_P001 | Zm00001e007103 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007956_P001 | ATRING1, RING1,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007957_P001 | ATL6, Zm00001e007957 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e014302_P001 | Zm00001e014302 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015259_P001 | Zm00001e015259 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e015470_P001 | ATL8, Zm00001e015470 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e016474_P001 | Zm00001e016474 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019779_P001 | Zm00001e019779 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032186_P001 | RHA3B, Zm00001e032186 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034421_P001 | ATL6, Zm00001e034421 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e034469_P001 | XERICO, Zm00001e034469 | ubiquitin protein ligase (XERICO) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003885 | D-arabinono-1,4-lactone oxidase activity | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016899 | oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 203 | 246 |
No external refs found! |