Sacu_v1.1_s0007.g003695 (PHB-1D, ATHB-14, PHB, ATHB14)

Aliases : PHB-1D, ATHB-14, PHB, ATHB14

Description : not classified & original description: CDS=3209-3661

Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0007.g003695

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00085520	ICU4, ATHB15,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Cba_g45098	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g19909	PHB-1D, ATHB-14,...	transcriptional co-regulator *(ZPR) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g50048	ICU4, ATHB15,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10435903g0010	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.03	OrthoFinder output from all 47 species
MA_41083g0010	PHV, ATHB9	pepsin-type protease	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	21	79

External Links

No external refs found!