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  5. Sacu_v1.1_s0006.g003180

Sacu_v1.1_s0006.g003180 (ELF3, PYK20)


Aliases : ELF3, PYK20

Description : component *(ELF3) of circadian clock Evening complex (EC) & original description: CDS=1-2766


Gene families : OG0001659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003180
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Adi_g076928 ELF3, PYK20 component *(ELF3) of circAdian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Aob_g04352 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Dac_g07054 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.03 OrthoFinder output from all 47 species
Msp_g14550 ELF3, PYK20 component *(ELF3) of circadian clock Evening complex... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!