- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : FMA
Description : bHLH-type transcription factor & original description: none
Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g05942 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272070 | FMA,... | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00008p00198780 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g03090 | FMA | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g19615 | FMA | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G040300.1 | Ceric.21G040300 | bHLH-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000157.61 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g12824 | FMA | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g15760.1 | SPCH, LOC_Os02g15760 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g50090.1 | LOC_Os04g50090 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g28288 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015494_P002 | Zm00001e015494 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e023271_P001 | Zm00001e023271 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041403_P001 | Zm00001e041403 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0009314 | response to radiation | IEP | HCCA |
| BP | GO:0009416 | response to light stimulus | IEP | HCCA |
| BP | GO:0009581 | detection of external stimulus | IEP | HCCA |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | HCCA |
| BP | GO:0009583 | detection of light stimulus | IEP | HCCA |
| BP | GO:0009584 | detection of visible light | IEP | HCCA |
| BP | GO:0009605 | response to external stimulus | IEP | HCCA |
| BP | GO:0009628 | response to abiotic stimulus | IEP | HCCA |
| BP | GO:0051606 | detection of stimulus | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 167 | 218 |
| No external refs found! |