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  5. Sacu_v1.1_s0006.g003133

Sacu_v1.1_s0006.g003133


Description : not classified & original description: CDS=1-1326


Gene families : OG0001845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003133
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00074340 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g017303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G020100.1 Ceric.34G020100 not classified & original description: pacid=50623092... 0.04 OrthoFinder output from all 47 species
Dcu_g41400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010242001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_00647 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_173856g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g28990.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp2g17160.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g17182 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g00767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025360_P003 Zm00001e025360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 370 429
No external refs found!