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  5. Sacu_v1.1_s0006.g003029

Sacu_v1.1_s0006.g003029 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: CDS=1-1392


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g003029

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00237390 AtTLP1, TLP1,... RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Adi_g003799 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07274 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17127 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16860 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G035900.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Cre12.g520650 TLP2, AtTLP2 RNA biosynthesis.transcriptional activation.TUB... 0.01 OrthoFinder output from all 47 species
Dcu_g12682 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g09266 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_103920g0010 AtTLP3, TLP3 transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Mp6g01640.1 AtTLP3, TLP3 transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Msp_g12641 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03056 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g062670.3.1 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Solyc10g046970.2.1 TLP10, AtTLP10,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e001672_P001 AtTLP3, TLP3,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 110 156
IPR000007 Tubby_C 171 458
No external refs found!