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  5. Sacu_v1.1_s0006.g002955

Sacu_v1.1_s0006.g002955


Description : C2H2 subclass Di19 transcription factor & original description: CDS=1-576


Gene families : OG0000852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g002955
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Adi_g022193 HRB1 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g077059 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g00511 HRB1 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g37143 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene68847.t1 HRB1, Aspi01Gene68847 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G053500.1 HRB1, Ceric.08G053500 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g11443 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g14742 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27275 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR008598 Di19_Zn-bd 40 91
No external refs found!