1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0006.g002932

Sacu_v1.1_s0006.g002932 (GDC1)


Aliases : GDC1

Description : SRP insertion system TIC-to-SRP handover factor *(LTD) & original description: CDS=1-504


Gene families : OG0006316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006316_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0006.g002932

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00076280 GDC1,... Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G50900 GDC1 Ankyrin repeat family protein 0.09 OrthoFinder output from all 47 species
Aev_g12435 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.02 OrthoFinder output from all 47 species
Aob_g00497 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Ceric.01G109700.1 GDC1, Ceric.01G109700 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Ceric.1Z282600.1 GDC1, Ceric.1Z282600 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Cre12.g551950 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Dac_g00424 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01002001001 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_05108 GDC1 SRP insertion system TIC-to-SRP handover factor (LTD) 0.04 OrthoFinder output from all 47 species
Gb_05109 GDC1 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os07g33660.1 GDC1, LOC_Os07g33660 SRP insertion system TIC-to-SRP handover factor (LTD) 0.06 OrthoFinder output from all 47 species
Len_g02031 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.06 OrthoFinder output from all 47 species
Lfl_g00282 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.06 OrthoFinder output from all 47 species
MA_450177g0010 GDC1 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp3g06400.1 GDC1 SRP insertion system TIC-to-SRP handover factor (LTD) 0.12 OrthoFinder output from all 47 species
Msp_g05859 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.02 OrthoFinder output from all 47 species
Nbi_g01699 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Pir_g00819 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Pp3c5_16520V3.1 GDC1, Pp3c5_16520 Ankyrin repeat family protein 0.02 OrthoFinder output from all 47 species
Ppi_g04901 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Sam_g23702 No alias SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Smo228083 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc10g006370.3.1 GDC1, Solyc10g006370 SRP insertion system TIC-to-SRP handover factor (LTD) 0.05 OrthoFinder output from all 47 species
Spa_g51015 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.07 OrthoFinder output from all 47 species
Zm00001e035117_P001 GDC1, Zm00001e035117 SRP insertion system TIC-to-SRP handover factor (LTD) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!