Sacu_v1.1_s0005.g002872

Description : regulatory protein *(CAD1) of Programmed Cell Death & original description: CDS=1-1986

Gene families : OG0000861 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000861_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0005.g002872
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00005p00141350	evm_27.TU.AmTr_v1...	MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00071p00180880	evm_27.TU.AmTr_v1...	MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_16359	CAD1	MACPF domain-containing protein CAD1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Ore_g36412	No alias	regulatory protein *(CAD1) of Programmed Cell Death &...	0.04	OrthoFinder output from all 47 species
Spa_g04745	CAD1	regulatory protein *(CAD1) of Programmed Cell Death &...	0.02	OrthoFinder output from all 47 species
Spa_g52276	CAD1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e028292_P001	Zm00001e028292	MACPF domain-containing protein At4g24290 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
CC	GO:0070531	BRCA1-A complex	IEP	HCCA
CC	GO:0070552	BRISC complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020864	MACPF	166	370

External Links

No external refs found!