Solyc09g061890.3.1 (Solyc09g061890.3)


Aliases : Solyc09g061890.3

Description : 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases Pectin lyase-like superfamily protein


Gene families : OG_01_0000238 (Gene family) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc09g061890.3.1
Cluster HCCA cluster: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G14420 AT59 Pectate lyase family protein 0.02 Gene family
AT2G02720 No alias Pectate lyase family protein 0.03 Gene family
AT4G13210 No alias Pectin lyase-like superfamily protein 0.03 Gene family
AT4G13710 No alias Pectin lyase-like superfamily protein 0.02 Gene family
AT5G15110 No alias Pectate lyase family protein 0.02 Gene family
LOC_Os10g31910 Os10g0457200 10.6.3 cell wall.degradation.pectate lyases and... 0.03 Gene family
MA_10430145g0030 No alias 10.6.3 cell wall.degradation.pectate lyases and... 0.04 Gene family
Solyc03g058890.3.1 Solyc03g058890.3 10.6.3 cell wall.degradation.pectate lyases and... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 174 355
No external refs found!