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  5. Sacu_v1.1_s0005.g002712

Sacu_v1.1_s0005.g002712


Description : not classified & original description: CDS=1-483


Gene families : OG0000033 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0005.g002712

Target Alias Description ECC score Gene Family Method Actions
AT1G10460 GLP7 germin-like protein 7 0.03 OrthoFinder output from all 47 species
Aev_g10405 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12300 GLP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28366.t1 GLP4, Aspi01Gene28366 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67888.t1 GLP5, Aspi01Gene67888 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z074500.1 GLP10, Ceric.1Z074500 not classified & original description: pacid=50634958... 0.03 OrthoFinder output from all 47 species
Ceric.20G043100.1 GL22, Ceric.20G043100 not classified & original description: pacid=50566937... 0.03 OrthoFinder output from all 47 species
Ceric.20G090000.1 GLP10, Ceric.20G090000 not classified & original description: pacid=50566421... 0.03 OrthoFinder output from all 47 species
Dac_g13353 GLP8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05079 GLP5 Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana... 0.02 OrthoFinder output from all 47 species
Lfl_g14345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45635 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo428138 No alias Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g006730.1.1 GLP10, Solyc11g006730 Germin-like protein 9-3 OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Spa_g37382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP HCCA
BP GO:0000272 polysaccharide catabolic process IEP HCCA
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC
  • GO:0005666
    		•  RNA polymerase III complex IEP HCCA
    CC GO:0005741 mitochondrial outer membrane IEP HCCA
    BP GO:0005976 polysaccharide metabolic process IEP HCCA
    BP GO:0006383 transcription by RNA polymerase III IEP HCCA
    BP GO:0006810 transport IEP HCCA
    BP GO:0006811 monoatomic ion transport IEP HCCA
    BP GO:0006812 monoatomic cation transport IEP HCCA
    MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
    BP GO:0009059 macromolecule biosynthetic process IEP HCCA
    MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
    MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
    MF GO:0015078 proton transmembrane transporter activity IEP HCCA
    MF GO:0016160 amylase activity IEP HCCA
    MF GO:0016161 beta-amylase activity IEP HCCA
    CC GO:0019867 outer membrane IEP HCCA
    MF GO:0019905 syntaxin binding IEP HCCA
    MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
    CC GO:0030880 RNA polymerase complex IEP HCCA
    CC GO:0031966 mitochondrial membrane IEP HCCA
    CC GO:0031968 organelle outer membrane IEP HCCA
    BP GO:0051179 localization IEP HCCA
    BP GO:0051234 establishment of localization IEP HCCA
    CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
    CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
    CC GO:0098588 bounding membrane of organelle IEP HCCA
    BP GO:1902600 proton transmembrane transport IEP HCCA
    InterPro domains Description Start Stop
    IPR006045 Cupin_1 75 159
    No external refs found!