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  5. Sacu_v1.1_s0005.g002538

Sacu_v1.1_s0005.g002538


Description : component *(STN1) of telomere integrity maintenance complex & original description: CDS=1625-2590


Gene families : OG0008308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008308_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0005.g002538
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Aev_g10010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68918.t1 Aspi01Gene68918 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0108.g045262 No alias not classified & original description: CDS=1-816 0.04 OrthoFinder output from all 47 species
Cre06.g281800 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g18588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27914 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10432313g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g10105 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c14_19950V3.1 Pp3c14_19950 Domain of unknown function (DUF1995) 0.01 OrthoFinder output from all 47 species
Tin_g09804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008175 tRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 94 184
IPR018962 DUF1995 90 290
No external refs found!