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  5. Sacu_v1.1_s0004.g002496

Sacu_v1.1_s0004.g002496


Description : not classified & original description: CDS=455-4975


Gene families : OG0001164 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001164_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002496

Target Alias Description ECC score Gene Family Method Actions
AT1G61100 No alias disease resistance protein (TIR class), putative 0.04 OrthoFinder output from all 47 species
Aev_g07334 CIP7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01177.t1 CIP7, Aspi01Gene01177 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28609.t1 Aspi01Gene28609 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0093.g043348 No alias not classified & original description: CDS=557-5053 0.03 OrthoFinder output from all 47 species
Cba_g04744 CIP7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G030300.1 CIP7, Ceric.06G030300 not classified & original description: pacid=50620816... 0.05 OrthoFinder output from all 47 species
Ceric.38G053200.1 CIP7, Ceric.38G053200 not classified & original description: pacid=50580137... 0.02 OrthoFinder output from all 47 species
Dac_g08926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_120662g0010 CIP7 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp5g20180.1 No alias COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g09029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078670.3.1 Solyc02g078670 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g063350.3.1 CIP7, Solyc07g063350 COP1-interacting protein 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g54055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!