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  5. Sacu_v1.1_s0004.g002471

Sacu_v1.1_s0004.g002471


Description : not classified & original description: CDS=17-1519


Gene families : OG0004557 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004557_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002471

Target Alias Description ECC score Gene Family Method Actions
AT5G60150 No alias unknown protein; Has 1807 Blast hits to 1807 proteins in... 0.03 OrthoFinder output from all 47 species
Als_g12841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04641 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55728.t1 Aspi01Gene55728 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G003800.1 Ceric.08G003800 not classified & original description: pacid=50638658... 0.03 OrthoFinder output from all 47 species
Dcu_g36728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025625001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_32323 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g12302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g18500.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g08579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g27994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e035088_P002 Zm00001e035088 MT plus-end-tracking protein (GPT) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004096 catalase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009291 Vps62 3 508
No external refs found!