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  5. Sacu_v1.1_s0004.g002445

Sacu_v1.1_s0004.g002445


Description : not classified & original description: CDS=162-1487


Gene families : OG0002022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002445

Target Alias Description ECC score Gene Family Method Actions
Als_g43368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21342 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012615 No alias not classified & original description: CDS=291-1721 0.05 OrthoFinder output from all 47 species
Dac_g22813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g02756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c5_12950V3.1 Pp3c5_12950 Thioredoxin superfamily protein 0.01 OrthoFinder output from all 47 species
Spa_g12509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR032801 PXL2A/B/C 305 418
No external refs found!