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  5. Sacu_v1.1_s0004.g002387

Sacu_v1.1_s0004.g002387


Description : not classified & original description: CDS=1-2268


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002387

Target Alias Description ECC score Gene Family Method Actions
Adi_g080183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g21019 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42055.t1 Aspi01Gene42055 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45871.t1 Aspi01Gene45871 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66629.t1 Aspi01Gene66629 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22569 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017824001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01021980001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01030061001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_21956 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g27740.3 LOC_Os01g27740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g29277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_18430V3.1 Pp3c2_18430 DNAJ heat shock N-terminal domain-containing protein 0.01 OrthoFinder output from all 47 species
Tin_g03476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR024593 DUF3444 525 733
IPR001623 DnaJ_domain 68 129
No external refs found!