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  5. Sacu_v1.1_s0004.g002269

Sacu_v1.1_s0004.g002269


Description : not classified & original description: CDS=18-2435


Gene families : OG0000255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000255_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0004.g002269
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT3G04960 No alias Domain of unknown function (DUF3444) 0.04 OrthoFinder output from all 47 species
AT3G05110 No alias Domain of unknown function (DUF3444) 0.05 OrthoFinder output from all 47 species
AT4G27980 No alias Domain of unknown function (DUF3444) 0.04 OrthoFinder output from all 47 species
AT5G35753 No alias Domain of unknown function (DUF3444) 0.03 OrthoFinder output from all 47 species
Als_g15554 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20912.t1 Aspi01Gene20912 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29526.t1 Aspi01Gene29526 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z143700.1 Ceric.1Z143700 not classified & original description: pacid=50582097... 0.04 OrthoFinder output from all 47 species
Ehy_g05988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008568001 No alias No description available 0.02 OrthoFinder output from all 47 species
Msp_g13928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14858 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g06761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20600 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 68 129
IPR024593 DUF3444 576 784
No external refs found!