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  5. AMTR_s00148p00070910

AMTR_s00148p00070910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00148.45

Description : Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana


Gene families : OG_01_0011533 (Archaeplastida) Phylogenetic Tree(s): OG_01_0011533_tree ,
OG_02_0011433 (LandPlants) Phylogenetic Tree(s): OG_02_0011433_tree ,
OG_03_0011536 (SeedPlants) Phylogenetic Tree(s): OG_03_0011536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00148p00070910
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01010112001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
GSVIVT01010112001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 LandPlants
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 403 441
IPR002885 Pentatricopeptide_repeat 333 382
IPR002885 Pentatricopeptide_repeat 543 592
IPR002885 Pentatricopeptide_repeat 264 311
IPR002885 Pentatricopeptide_repeat 194 242
IPR002885 Pentatricopeptide_repeat 615 661
IPR002885 Pentatricopeptide_repeat 476 522
IPR002885 Pentatricopeptide_repeat 687 716
IPR002885 Pentatricopeptide_repeat 723 751
IPR002885 Pentatricopeptide_repeat 442 470
No external refs found!