AMTR_s00148p00070910 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00148.45

Description : Putative pentatricopeptide repeat-containing protein At1g13630 OS=Arabidopsis thaliana


Gene families : OG_01_0011533 (Archaeplastida) Phylogenetic Tree(s): OG_01_0011533_tree ,
OG_02_0011433 (LandPlants) Phylogenetic Tree(s): OG_02_0011433_tree ,
OG_03_0011536 (SeedPlants) Phylogenetic Tree(s): OG_03_0011536_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00148p00070910
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Archaeplastida
GSVIVT01010112001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 LandPlants
GSVIVT01010112001 No alias Putative pentatricopeptide repeat-containing protein... 0.02 LandPlants
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.03 LandPlants
AT1G13630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
LOC_Os10g33874.1 No alias Putative pentatricopeptide repeat-containing protein... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 403 441
IPR002885 Pentatricopeptide_repeat 333 382
IPR002885 Pentatricopeptide_repeat 543 592
IPR002885 Pentatricopeptide_repeat 264 311
IPR002885 Pentatricopeptide_repeat 194 242
IPR002885 Pentatricopeptide_repeat 615 661
IPR002885 Pentatricopeptide_repeat 476 522
IPR002885 Pentatricopeptide_repeat 687 716
IPR002885 Pentatricopeptide_repeat 723 751
IPR002885 Pentatricopeptide_repeat 442 470
No external refs found!