Sacu_v1.1_s0004.g002110

Description : rRNA processing factor *(RRP1) & original description: CDS=1-1626

Gene families : OG0002504 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002504_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0004.g002110

Target	Alias	Description	ECC score	Gene Family Method
Ala_g27956	No alias	rRNA processing factor *(RRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g02495	No alias	rRNA processing factor *(RRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g05940	No alias	rRNA processing factor *(RRP1) & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g07663	No alias	rRNA processing factor *(RRP1) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g15089	No alias	rRNA processing factor *(RRP1) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	IEA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
CC	GO:0030684	preribosome	None	Extended
CC	GO:0030688	preribosome, small subunit precursor	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010301	RRP1	18	218

External Links

No external refs found!