Sacu_v1.1_s0003.g002015


Description : not classified & original description: CDS=1-393


Gene families : OG0000039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g002015
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Aev_g44563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29673.t1 Aspi01Gene29673 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58286.t1 Aspi01Gene58286 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035352 No alias not classified & original description: CDS=1-705 0.04 OrthoFinder output from all 47 species
Cba_g37557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G079300.1 Ceric.13G079300 not classified & original description: pacid=50635006... 0.03 OrthoFinder output from all 47 species
Gb_22439 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Len_g45948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19050 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19743 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g22329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18924 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!