1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0003.g001928

Sacu_v1.1_s0003.g001928


Description : splicing factor *(SR45a) & original description: CDS=1-888


Gene families : OG0001089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001089_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001928

Target Alias Description ECC score Gene Family Method Actions
AT1G07350 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Adi_g042679 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043406 No alias splicing factor *(SR45a) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36442 No alias splicing factor *(SR45a) & original description: none 0.02 OrthoFinder output from all 47 species
Gb_20180 No alias Serine/arginine-rich splicing factor SR45a... 0.01 OrthoFinder output from all 47 species
LOC_Os08g29650.1 LOC_Os08g29650 Serine/arginine-rich splicing factor SR45a... 0.02 OrthoFinder output from all 47 species
Len_g03706 No alias splicing factor *(SR45a) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17120 No alias splicing factor *(SR45a) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07839 No alias splicing factor *(SR45a) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 57 126
No external refs found!