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  5. Sacu_v1.1_s0003.g001848

Sacu_v1.1_s0003.g001848


Description : not classified & original description: CDS=1-3909


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001848
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Ala_g05168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21623 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g64510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35765.t1 Aspi01Gene35765 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035473 No alias not classified & original description: CDS=1-4050 0.06 OrthoFinder output from all 47 species
Cba_g13826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g22385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G017200.1 Ceric.03G017200 not classified & original description: pacid=50571554... 0.06 OrthoFinder output from all 47 species
Ceric.29G059500.1 Ceric.29G059500 N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.06 OrthoFinder output from all 47 species
Dac_g32171 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g19973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031118001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_18977 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_40891 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10434021g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g43747 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13020 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g16152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g15700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006475 internal protein amino acid acetylation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016573 histone acetylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018393 internal peptidyl-lysine acetylation IEP HCCA
BP GO:0018394 peptidyl-lysine acetylation IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 321 404
No external refs found!