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Aliases : WLIM1
Description : LIM-type transcription factor & original description: CDS=1-612
Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0003.g001741 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00009p00259550 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00168710 | WLIM1,... | RNA biosynthesis.transcriptional activation.LIM... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G39900 | No alias | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G61230 | No alias | GATA type zinc finger transcription factor family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g048674 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g077331 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g097642 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g098070 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07526 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g22808 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g19801 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g21872 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g10839 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27190 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g12127 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene10089.t1 | WLIM1, Aspi01Gene10089 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene53056.t1 | Aspi01Gene53056 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene62649.t1 | WLIM1, Aspi01Gene62649 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g39812 | No alias | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g06068 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g26985 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03324 | No alias | LIM-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g27988 | WLIM1 | LIM-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_09450 | No alias | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g32620.1 | WLIM1, LOC_Os12g32620 | transcription factor (LIM) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g05819 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g27678 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06617 | WLIM1 | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08756 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g16712 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g00662 | WLIM1 | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14488 | No alias | LIM-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo143123 | WLIM1 | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| Smo229974 | No alias | RNA biosynthesis.transcriptional activation.LIM... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g114000.3.1 | WLIM1, Solyc03g114000 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g049870.3.1 | Solyc05g049870 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g017520.3.1 | Solyc10g017520 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g088320.2.1 | WLIM1, Solyc12g088320 | transcription factor (LIM) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g53439 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04312 | No alias | LIM-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018310_P001 | WLIM1, Zm00001e018310 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023098_P001 | Zm00001e023098 | transcription factor (LIM) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015689 | molybdate ion transport | IEP | HCCA |
| BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
| MF | GO:0016160 | amylase activity | IEP | HCCA |
| MF | GO:0016161 | beta-amylase activity | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
| MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| No external refs found! |