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  5. Sacu_v1.1_s0003.g001645

Sacu_v1.1_s0003.g001645


Description : not classified & original description: CDS=1-1014


Gene families : OG0000317 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000317_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001645

Target Alias Description ECC score Gene Family Method Actions
AT3G54240 No alias alpha/beta-Hydrolases superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g007431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g025814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012743 No alias not classified & original description: CDS=30-722 0.04 OrthoFinder output from all 47 species
Dde_g14733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01036139001 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os10g37720.1 LOC_Os10g37720 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g05600.1 LOC_Os12g05600 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18669g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g02230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g43739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0179.g024773 No alias not classified & original description: CDS=588-1532 0.04 OrthoFinder output from all 47 species
Sam_g16650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g009500.4.1 Solyc01g009500 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g009520.3.1 Solyc09g009520 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g40956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039069_P002 Zm00001e039069 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 33 294
No external refs found!