Sacu_v1.1_s0003.g001580 (SDE3)

Aliases : SDE3

Description : not classified & original description: CDS=1-4143

Gene families : OG0002062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002062_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0003.g001580
Cluster	HCCA: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
Adi_g015269	SDE3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene40408.t1	SDE3, Aspi01Gene40408	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g12778	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001594	No alias	not classified & original description: CDS=1-4806	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001604	No alias	not classified & original description: CDS=1-468	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041679	DNA2/NAM7-like_C	1134	1343
IPR041677	DNA2/NAM7_AAA_11	720	1123

External Links

No external refs found!