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  5. Sacu_v1.1_s0003.g001576

Sacu_v1.1_s0003.g001576


Description : not classified & original description: CDS=1-1017


Gene families : OG0002062 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001576

Target Alias Description ECC score Gene Family Method Actions
Adi_g015269 SDE3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40408.t1 SDE3, Aspi01Gene40408 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G006300.1 SDE3, Ceric.04G006300 not classified & original description: pacid=50632199... 0.03 OrthoFinder output from all 47 species
Ceric.04G049200.1 ATL8, Ceric.04G049200 not classified & original description: pacid=50632039... 0.01 OrthoFinder output from all 47 species
Ceric.04G101100.1 Ceric.04G101100 not classified & original description: pacid=50630665... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR046439 ZF_RZ_dom 264 316
No external refs found!