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  5. Sacu_v1.1_s0003.g001425

Sacu_v1.1_s0003.g001425


Description : component *(Cox-X1) of cytochrome c oxidase complex & original description: CDS=1-294


Gene families : OG0003648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001425

Target Alias Description ECC score Gene Family Method Actions
Ceric.22G027600.1 Ceric.22G027600 not classified & original description: pacid=50614998... 0.03 OrthoFinder output from all 47 species
GSVIVT01035144001 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g099820.3.1 Solyc01g099820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023960_P001 Zm00001e023960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e030559_P001 Zm00001e030559 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
BP GO:0046483 heterocycle metabolic process
 IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!