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  5. Sacu_v1.1_s0003.g001388

Sacu_v1.1_s0003.g001388


Description : not classified & original description: CDS=1-1488


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0003.g001388

Target Alias Description ECC score Gene Family Method Actions
ATMG00850 ORF107E DNA/RNA polymerases superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g102253 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g17460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14457.t1 Aspi01Gene14457 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15138.t1 Aspi01Gene15138 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene19122.t1 Aspi01Gene19122 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28693.t1 Aspi01Gene28693 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39381.t1 ORF107E, Aspi01Gene39381 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59802.t1 Aspi01Gene59802 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60389.t1 Aspi01Gene60389 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63567.t1 ORF107E, Aspi01Gene63567 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033868 No alias not classified & original description: CDS=1-540 0.01 OrthoFinder output from all 47 species
Cba_g20061 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000881.27 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.01 OrthoFinder output from all 47 species
Dac_g12725 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g33338 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g18774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17097 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45313 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 352 493
No external refs found!