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  5. Ehy_g05842

Ehy_g05842 (UVR3)


Aliases : UVR3

Description : 6-4-type photolyase *(UVR3) & original description: none


Gene families : OG0005526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005526_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g05842
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Ala_g27153 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000391.2 UVR3 DNA damage response.DNA repair... 0.02 OrthoFinder output from all 47 species
Dde_g06257 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20466 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05205 UVR3 6-4-type photolyase *(UVR3) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g042910.2.1 UVR3, Solyc12g042910 6-4-type photolyase (UVR3) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 336 532
IPR006050 DNA_photolyase_N 43 210
No external refs found!