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  5. Sacu_v1.1_s0002.g001308

Sacu_v1.1_s0002.g001308


Description : not classified & original description: CDS=285-1844


Gene families : OG0002169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001308
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Als_g03127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g42978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!