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  5. Sacu_v1.1_s0002.g001284

Sacu_v1.1_s0002.g001284


Description : component *(uS9) of small ribosomal-subunit (SSU) proteome & original description: CDS=1-435


Gene families : OG0002224 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001284

Target Alias Description ECC score Gene Family Method Actions
Cre13.g573351 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
GSVIVT01017923001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Mp1g14290.1 No alias component RPS16 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc01g068530.3.1 Solyc01g068530 component RPS16 of SSU proteome 0.02 OrthoFinder output from all 47 species
Solyc05g005690.1.1 Solyc05g005690 component RPS16 of SSU proteome 0.02 OrthoFinder output from all 47 species
Zm00001e020865_P003 Zm00001e020865 component RPS16 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 11 138
No external refs found!