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  5. Sacu_v1.1_s0002.g001213

Sacu_v1.1_s0002.g001213


Description : deubiquitinase & original description: CDS=59-790


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001213
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cba_g17272 No alias deubiquitinase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.05G032700.1 Ceric.05G032700 deubiquitinase & original description: pacid=50578995... 0.03 OrthoFinder output from all 47 species
Ppi_g39208 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 20 153
No external refs found!