1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0002.g001177

Sacu_v1.1_s0002.g001177


Description : protein involved in PS-I assembly *(PPD1) & original description: CDS=100-873


Gene families : OG0006534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006534_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001177

Target Alias Description ECC score Gene Family Method Actions
AT4G15510 No alias Photosystem II reaction center PsbP family protein 0.06 OrthoFinder output from all 47 species
Als_g00378 No alias protein involved in PS-I assembly *(PPD1) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene47777.t1 Aspi01Gene47777 protein involved in PS-I assembly *(PPD1) & original... 0.04 OrthoFinder output from all 47 species
Cre08.g362900 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Dac_g08500 No alias protein involved in PS-I assembly *(PPD1) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g37634 No alias protein involved in PS-I assembly *(PPD1) & original... 0.08 OrthoFinder output from all 47 species
Dde_g22755 No alias protein involved in PS-I assembly *(PPD1) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g18351 No alias protein involved in PS-I assembly *(PPD1) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os07g17390.1 LOC_Os07g17390 PPD1 protein involved in PS-I assembly 0.05 OrthoFinder output from all 47 species
LOC_Os12g37710.1 LOC_Os12g37710 PPD1 protein involved in PS-I assembly 0.07 OrthoFinder output from all 47 species
Lfl_g08661 No alias protein involved in PS-I assembly *(PPD1) & original... 0.06 OrthoFinder output from all 47 species
MA_81231g0010 No alias PPD1 protein involved in PS-I assembly 0.09 OrthoFinder output from all 47 species
Mp1g27590.1 No alias PPD1 protein involved in PS-I assembly 0.06 OrthoFinder output from all 47 species
Nbi_g19709 No alias protein involved in PS-I assembly *(PPD1) & original... 0.06 OrthoFinder output from all 47 species
Ore_g17945 No alias protein involved in PS-I assembly *(PPD1) & original... 0.02 OrthoFinder output from all 47 species
Pir_g10011 No alias protein involved in PS-I assembly *(PPD1) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g106090.3.1 Solyc01g106090 PPD1 protein involved in PS-I assembly 0.08 OrthoFinder output from all 47 species
Spa_g12584 No alias protein involved in PS-I assembly *(PPD1) & original... 0.07 OrthoFinder output from all 47 species
Zm00001e002887_P002 Zm00001e002887 PPD1 protein involved in PS-I assembly 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 78 254
No external refs found!