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  5. Sacu_v1.1_s0002.g001086

Sacu_v1.1_s0002.g001086 (POLA2)


Aliases : POLA2

Description : replication fork tethering component *(POLA2) of DNA polymerase alpha complex & original description: CDS=72-2033


Gene families : OG0007931 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001086
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00201540 POLA2,... Cell cycle.interphase.DNA replication.elongation.DNA... 0.05 OrthoFinder output from all 47 species
AT1G67630 POLA2 DNA polymerase alpha 2 0.07 OrthoFinder output from all 47 species
Adi_g087012 POLA2 replication fork tethering component *(POLA2) of DNA... 0.03 OrthoFinder output from all 47 species
Als_g48017 POLA2 replication fork tethering component *(POLA2) of DNA... 0.05 OrthoFinder output from all 47 species
Aop_g00724 POLA2 replication fork tethering component *(POLA2) of DNA... 0.12 OrthoFinder output from all 47 species
Aspi01Gene33933.t1 POLA2, Aspi01Gene33933 replication fork tethering component *(POLA2) of DNA... 0.05 OrthoFinder output from all 47 species
Ceric.33G056000.1 POLA2, Ceric.33G056000 replication fork tethering component *(POLA2) of DNA... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001107.10 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.06 OrthoFinder output from all 47 species
Cre01.g017450 POLA2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.04 OrthoFinder output from all 47 species
Dac_g09664 POLA2 replication fork tethering component *(POLA2) of DNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01010354001 POLA2 Cell cycle.interphase.DNA replication.elongation.DNA... 0.1 OrthoFinder output from all 47 species
Gb_31734 POLA2 replication fork tethering component POLA2 of DNA... 0.12 OrthoFinder output from all 47 species
LOC_Os12g13950.1 POLA2, LOC_Os12g13950 replication fork tethering component POLA2 of DNA... 0.07 OrthoFinder output from all 47 species
Len_g14276 POLA2 replication fork tethering component *(POLA2) of DNA... 0.04 OrthoFinder output from all 47 species
MA_14020g0030 POLA2 replication fork tethering component POLA2 of DNA... 0.08 OrthoFinder output from all 47 species
Mp6g03190.1 POLA2 replication fork tethering component POLA2 of DNA... 0.1 OrthoFinder output from all 47 species
Nbi_g11355 POLA2 replication fork tethering component *(POLA2) of DNA... 0.02 OrthoFinder output from all 47 species
Ppi_g13980 POLA2 replication fork tethering component *(POLA2) of DNA... 0.05 OrthoFinder output from all 47 species
Solyc05g014540.3.1 POLA2, Solyc05g014540 replication fork tethering component POLA2 of DNA... 0.07 OrthoFinder output from all 47 species
Spa_g39148 POLA2 replication fork tethering component *(POLA2) of DNA... 0.09 OrthoFinder output from all 47 species
Tin_g04110 POLA2 replication fork tethering component *(POLA2) of DNA... 0.04 OrthoFinder output from all 47 species
Zm00001e039659_P001 POLA2, Zm00001e039659 replication fork tethering component POLA2 of DNA... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003876 AMP deaminase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006188 IMP biosynthetic process IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032261 purine nucleotide salvage IEP HCCA
BP GO:0032264 IMP salvage IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0032780 negative regulation of ATP-dependent activity IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0042555 MCM complex IEP HCCA
BP GO:0043086 negative regulation of catalytic activity IEP HCCA
BP GO:0043094 cellular metabolic compound salvage IEP HCCA
BP GO:0043101 purine-containing compound salvage IEP HCCA
BP GO:0043173 nucleotide salvage IEP HCCA
BP GO:0043462 regulation of ATP-dependent activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044092 negative regulation of molecular function IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046040 IMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0047623 adenosine-phosphate deaminase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051095 regulation of helicase activity IEP HCCA
BP GO:0051097 negative regulation of helicase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0106380 purine ribonucleotide salvage IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1905462 regulation of DNA duplex unwinding IEP HCCA
BP GO:1905463 negative regulation of DNA duplex unwinding IEP HCCA
BP GO:1905774 regulation of DNA helicase activity IEP HCCA
BP GO:1905775 negative regulation of DNA helicase activity IEP HCCA
BP GO:2001251 negative regulation of chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR013627 Pol_alpha_B_N 23 248
IPR007185 DNA_pol_a/d/e_bsu 377 587
No external refs found!