Cpa|evm.model.tig00021680.25


Description : 20.2.2 stress.abiotic.cold Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing. high expression of osmotically responsive genes 15 (HOS15)


Gene families : OG_01_0001588 (Gene family) Phylogenetic Tree(s): OG0001588_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00021680.25
Cluster HCCA cluster: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cre12.g527500 No alias 27.3.55 RNA.regulation of transcription.HDA Encodes a... 0.01 Gene family
Solyc04g078320.3.1 Solyc04g078320.3 20.2.2 stress.abiotic.cold Encodes a WD-40 protein... 0.02 Gene family
Zm00001d025048 GRMZM2G159330 27.3.55 RNA.regulation of transcription.HDA Encodes a... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006594 LisH 7 33
IPR001680 WD40_repeat 304 340
IPR001680 WD40_repeat 180 206
IPR001680 WD40_repeat 351 396
IPR001680 WD40_repeat 211 248
No external refs found!