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  5. Sacu_v1.1_s0002.g001068

Sacu_v1.1_s0002.g001068 (MAA3)


Aliases : MAA3

Description : RNA helicase (MAA3) involved in gametogenesis & original description: CDS=158-2692


Gene families : OG0004113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g001068
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
Als_g04450 MAA3 RNA helicase (MAA3) involved in gametogenesis & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0046.g030240 MAA3 RNA helicase (MAA3) involved in gametogenesis & original... 0.03 OrthoFinder output from all 47 species
Ceric.36G027600.1 MAA3, Ceric.36G027600 RNA helicase (MAA3) involved in gametogenesis & original... 0.06 OrthoFinder output from all 47 species
Cre06.g263800 MAA3 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Mp5g10130.1 MAA3 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Sam_g38478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g49566 No alias RNA helicase (MAA3) involved in gametogenesis & original... 0.07 OrthoFinder output from all 47 species
Spa_g15859 MAA3 RNA helicase (MAA3) involved in gametogenesis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR041677 DNA2/NAM7_AAA_11 260 440
IPR041677 DNA2/NAM7_AAA_11 458 504
IPR041679 DNA2/NAM7-like_C 552 747
No external refs found!