Aliases : NCLPP4, CLPP4
Description : proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex & original description: CDS=226-1143
Gene families : OG0000552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000552_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00105p00043000 | CLPP3, NCLPP3,... | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
AT5G45390 | NCLPP4, CLPP4 | CLP protease P4 | 0.07 | OrthoFinder output from all 47 species | |
Adi_g016781 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Adi_g017748 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
Adi_g022234 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
Adi_g053255 | CLPP2, NCLPP7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g107266 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g00900 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
Ala_g05972 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g06348 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Als_g02394 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Als_g27637 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g01531 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g09541 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g11466 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0222.g058774 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0454.g071292 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g02522 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g04410 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.13G060200.1 | CLPP3, NCLPP3,... | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020553.201 | NCLPP4, CLPP4 | ATP-dependent Clp protease proteolytic subunit 4,... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g486100 | NCLPP1, CLPP5, NCLPP5 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
Cre12.g500950 | NCLPP4, CLPP4 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g18251 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g02563 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g03766 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g07390 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g02659 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g12975 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g52147 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g00664 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.08 | OrthoFinder output from all 47 species | |
Ehy_g00970 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.09 | OrthoFinder output from all 47 species | |
Ehy_g22353 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01020796001 | NCLPP4, CLPP4 | Protein degradation.peptidase families.serine-type... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01028130001 | NCLPP1, CLPP5, NCLPP5 | Protein degradation.peptidase families.serine-type... | 0.06 | OrthoFinder output from all 47 species | |
Gb_02667 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g32350.1 | CLPP3, NCLPP3,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os02g42290.3 | CLPP2, NCLPP7,... | ATP-dependent Clp protease proteolytic subunit 2,... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g19510.1 | NCLPP1, CLPP5,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os10g43050.1 | NCLPP4, CLPP4,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Len_g01683 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
Len_g28306 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Len_g28307 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.09 | OrthoFinder output from all 47 species | |
Lfl_g05262 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g27459 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g37808 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
MA_159916g0010 | CLPP3, NCLPP3 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
MA_164820g0010 | CLPP3, NCLPP3 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g12460.1 | NCLPP4, CLPP4 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.11 | OrthoFinder output from all 47 species | |
Mp2g19280.1 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.07 | OrthoFinder output from all 47 species | |
Mp3g07790.1 | CLPP3, NCLPP3 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g00395 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g19928 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07728 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g12183 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g12472 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g08101 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
Pir_g00910 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g10039 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
Pnu_g14043 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g17018 | CLPP3, NCLPP3 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c24_11660V3.1 | NCLPP1, CLPP5,... | nuclear encoded CLP protease 5 | 0.05 | OrthoFinder output from all 47 species | |
Pp3c5_27640V3.1 | NCLPP4, CLPP4,... | CLP protease P4 | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g00602 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.08 | OrthoFinder output from all 47 species | |
Ppi_g10398 | NCLPP4, CLPP4 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g06534 | No alias | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g07488 | No alias | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
Smo233821 | NCLPP4, CLPP4 | Protein degradation.peptidase families.serine-type... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g100520.3.1 | NCLPP1, CLPP5,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g091280.3.1 | CLPP3, NCLPP3,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.06 | OrthoFinder output from all 47 species | |
Solyc08g075750.4.1 | NCLPP4, CLPP4,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g10206 | NCLPP1, CLPP5, NCLPP5 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e002511_P002 | NCLPP4, CLPP4,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e038326_P005 | NCLPP1, CLPP5,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016831 | carboxy-lyase activity | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023562 | ClpP/TepA | 89 | 265 |
No external refs found! |