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  5. Sacu_v1.1_s0002.g000982

Sacu_v1.1_s0002.g000982 (emb2726)


Aliases : emb2726

Description : not classified & original description: CDS=1-1401


Gene families : OG0003614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g000982

Target Alias Description ECC score Gene Family Method Actions
Adi_g089954 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g108527 emb2726 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g19464 emb2726 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g26890 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05824 emb2726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63156.t1 emb2726, Aspi01Gene63156 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0113.g045909 emb2726 not classified & original description: CDS=1-1431 0.05 OrthoFinder output from all 47 species
Cba_g23205 emb2726 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.32G048200.1 emb2726, Ceric.32G048200 not classified & original description: pacid=50597994... 0.09 OrthoFinder output from all 47 species
Dac_g28821 emb2726 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g32633 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22164 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22898 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g08036 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04910 emb2726 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10331 emb2726 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g65444 emb2726 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57412 emb2726 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g36866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g10898 emb2726 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g14739 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20885 emb2726 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 145 211
IPR003029 S1_domain 242 307
No external refs found!