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  5. Sacu_v1.1_s0002.g000891

Sacu_v1.1_s0002.g000891 (RCD3, CDI3, SLAC1, OZS1)


Aliases : RCD3, CDI3, SLAC1, OZS1

Description : anion channel *(SLAC) & original description: CDS=1-2010


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g000891
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT4G27970 SLAH2 SLAC1 homologue 2 0.03 OrthoFinder output from all 47 species
Aspi01Gene21036.t1 SLAH2, Aspi01Gene21036 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30828.t1 RCD3, CDI3,... anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31718.t2 SLAH3, Aspi01Gene31718 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0107.g045144 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=405-2693 0.01 OrthoFinder output from all 47 species
Ceric.14G072500.1 RCD3, CDI3,... anion channel *(SLAC) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g35133 RCD3, CDI3, SLAC1, OZS1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g31369 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g12680.1 SLAH3, LOC_Os01g12680 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
LOC_Os01g14520.1 SLAH1, LOC_Os01g14520 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
LOC_Os01g28840.1 SLAH3, LOC_Os01g28840 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
MA_301724g0010 SLAH3 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Mp5g19130.1 SLAH3 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
Ore_g35935 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g66064 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g007770.3.1 SLAH3, Solyc03g007770 anion channel (SLAC) 0.02 OrthoFinder output from all 47 species
Solyc06g036440.2.1 SLAH3, Solyc06g036440 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Zm00001e016340_P001 SLAH1, Zm00001e016340 anion channel (SLAC) 0.04 OrthoFinder output from all 47 species
Zm00001e026633_P001 SLAH2, Zm00001e026633 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Zm00001e032558_P001 SLAH2, Zm00001e032558 anion channel (SLAC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 288 624
No external refs found!