1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0002.g000884

Sacu_v1.1_s0002.g000884 (CPL4)


Aliases : CPL4

Description : subcluster H/CPL3-4 phosphatase & original description: CDS=250-1764


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0002.g000884
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00017820 CPL4,... Protein modification.dephosphorylation.aspartate-based... 0.02 OrthoFinder output from all 47 species
Aob_g05116 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020250001 CPL4 No description available 0.03 OrthoFinder output from all 47 species
Solyc12g063050.3.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0003972 RNA ligase (ATP) activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0008452 RNA ligase activity IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004274 FCP1_dom 148 317
No external refs found!