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  5. Sacu_v1.1_s0001.g000793

Sacu_v1.1_s0001.g000793 (SS2, AtSS2)


Aliases : SS2, AtSS2

Description : EC_2.4 glycosyltransferase & original description: CDS=352-2862


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000793
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT5G24300 SSI1, ATSS1, SSI Glycogen/starch synthases, ADP-glucose type 0.03 OrthoFinder output from all 47 species
Adi_g055188 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g04105 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20539 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02293 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08363 SS2, AtSS2 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69405 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g53636 SSI1, ATSS1, SSI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre04.g215150 SSI1, ATSS1, SSI Enzyme classification.EC_2 transferases.EC_2.4... 0.01 OrthoFinder output from all 47 species
Dcu_g04884 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20941 SS2, AtSS2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g51070.1 SS2, AtSS2,... starch synthase (SSII) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06560.1 SSI1, ATSS1,... starch synthase (SSI) 0.01 OrthoFinder output from all 47 species
Len_g11881 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01990 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g25350.1 SSI1, ATSS1, SSI starch synthase (SSI) 0.03 OrthoFinder output from all 47 species
Msp_g14449 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61350 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023903_P001 SS2, AtSS2,... starch synthase (SSII) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 584 728
IPR013534 Starch_synth_cat_dom 252 364
IPR013534 Starch_synth_cat_dom 383 525
No external refs found!