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  5. Sacu_v1.1_s0001.g000743

Sacu_v1.1_s0001.g000743


Description : not classified & original description: CDS=206-1516


Gene families : OG0000502 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000502_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000743
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00064700 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00091p00173550 evm_27.TU.AmTr_v1... No description available 0.01 OrthoFinder output from all 47 species
AT2G15590 No alias Protein of unknown function (DUF1685) 0.02 OrthoFinder output from all 47 species
AT5G28690 No alias Protein of unknown function (DUF1685) 0.03 OrthoFinder output from all 47 species
Aob_g03498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23338.t1 Aspi01Gene23338 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0167.g054472 No alias not classified & original description: CDS=1-825 0.04 OrthoFinder output from all 47 species
Cba_g05754 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G040700.1 Ceric.27G040700 not classified & original description: pacid=50605750... 0.03 OrthoFinder output from all 47 species
Dac_g20958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g11518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g13117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011903 No alias not classified & original description: CDS=1-993 0.03 OrthoFinder output from all 47 species
Smo97431 No alias No description available 0.01 OrthoFinder output from all 47 species
Spa_g38879 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021360_P001 Zm00001e021360 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012881 DUF1685 352 397
No external refs found!