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  5. Sacu_v1.1_s0001.g000739

Sacu_v1.1_s0001.g000739 (FAD2)


Aliases : FAD2

Description : delta-12/delta-15 fatty acid desaturase & original description: CDS=1-1128


Gene families : OG0001837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000739
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Dde_g07805 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Ore_g06325 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016352 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Zm00001e039637_P001 FAD2, Zm00001e039637 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 76 335
IPR021863 FAS_N 11 58
No external refs found!