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  5. Sacu_v1.1_s0001.g000599

Sacu_v1.1_s0001.g000599


Description : not classified & original description: CDS=1-1671


Gene families : OG0002444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0001.g000599

Target Alias Description ECC score Gene Family Method Actions
Adi_g004474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015393 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056152 No alias regulatory protein *(VQ) of WRKY activity & original... 0.04 OrthoFinder output from all 47 species
Ala_g20369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12667.t1 Aspi01Gene12667 regulatory protein *(VQ) of WRKY activity & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene13050.t2 Aspi01Gene13050 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G039800.1 Ceric.05G039800 not classified & original description: pacid=50578038... 0.03 OrthoFinder output from all 47 species
Ceric.1Z108800.1 Ceric.1Z108800 not classified & original description: pacid=50618873... 0.06 OrthoFinder output from all 47 species
Ceric.20G008900.1 Ceric.20G008900 not classified & original description: pacid=50566947... 0.06 OrthoFinder output from all 47 species
Dcu_g47924 No alias component *(MED19) of head module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Dde_g23020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g30102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06616 No alias regulatory protein *(VQ) of WRKY activity & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 223 245
No external refs found!