Sacu_v1.1_s0001.g000555 (VAC1, ECB2, ATECB2)

Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: CDS=1-3279

Gene families : OG0017943 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0017943_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0001.g000555

Target	Alias	Description	ECC score	Gene Family Method	Actions
Dde_g48514	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006281	DNA repair	IEP	HCCA
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	197	243
IPR002885	Pentatricopeptide_repeat	776	822
IPR002885	Pentatricopeptide_repeat	639	687
IPR002885	Pentatricopeptide_repeat	95	143
IPR002885	Pentatricopeptide_repeat	912	960
IPR002885	Pentatricopeptide_repeat	434	481
IPR002885	Pentatricopeptide_repeat	613	633
IPR002885	Pentatricopeptide_repeat	402	429
IPR002885	Pentatricopeptide_repeat	881	910
IPR002885	Pentatricopeptide_repeat	539	568
IPR002885	Pentatricopeptide_repeat	990	1011
IPR002885	Pentatricopeptide_repeat	851	874
IPR002885	Pentatricopeptide_repeat	272	295

External Links

No external refs found!